Table 2. Species-specific diagnostic markers developed from specific genes.   

Species Locus Assay type Reference
P. citricola Ypt1 gene Real time Schena et al. 2006 (Molecular Plant Pathology 7:365-379)
Schena et al. 2008 (Plant Pathology 57:64-75)
P. cactorum Ypt1 gene Real time Schena et al. 2008 (Plant Pathology 57:64-75)
P. cambivora Ypt1 gene Real time Schena et al. 2008 (Plant Pathology 57:64-75)
P. cinnamomi Cina gene
Lpv gene
Ypt1 gene
Capture probe
Conventional
Real time
Coelho et al. 1997 (Mycol. Res. 101:1499-1507)
Kong et al. 2003 ( 52:681-693)
Schena et al. 2008 (Plant Pathology 57:64-75)
P. erythroseptica rpb1 Real time Atallah and Stevenson 2006 (Phytopathology 96:1037-1045)
P. europea Ypt1 gene Real time Schena et al. 2008 (European Journal of Plant Pathology 103:73-83)
P. fragariae ras
trp1
Conventional
Conventional
Ioos et al. 2006. (European Journal of Plant Pathology 116:171-176)
Ioos et al. 2006. (European Journal of Plant Pathology 116:171-176)
P. ilicis Ypt1 gene Real time Schena et al. 2008 (Plant Pathology 57:64-75)
P. infestans ras Real time Atallah and Stevenson 2006 (Phytopathology 96:1037-1045)
P. inundata Ypt1 gene Real time Schena et al. 2008 (Plant Pathology 57:64-75)
P. kernoviae Ypt1 gene Real time Schena et al. 2006 (Molecular Plant Pathology 7:365-379)
Schena et al. 2008 (Plant Pathology 57:64-75)
P. lateralis Ypt1 gene Real time Schena et al. 2008 (Plant Pathology 57:64-75)
P. megasperma Ypt1 gene Real time Schena et al. 2008 (Plant Pathology 57:64-75)
P. nicotianae elicitin gene Conventional Lacourt and Duncan 1997 (European Journal of Plant Pathology 103:73-83)
Kong et al. 2003 ( 52:681-693)
P. nemorosa Ypt1 gene
cox spacer
Real time
Conventional
Schena et al. 2008 (Plant Pathology 57:64-75)
Martin et al. 2004 (Phytopathology 94:621-631)
P. pseudosyringae Ypt1 gene
cox spacer
Real time
Conventional
Real time
Schena et al. 2008 (Plant Pathology 57:64-75)
Martin et al. 2004 (Phytopathology 94:621-631)
Tooley et al. 2006 (Phytopathology 97:632-642)
P. psychrophila Ypt1 gene Real time Schena et al. 2008 (Plant Pathology 57:64-75)
P. quercina Ypt1 gene Real time Schena et al. 2006 (Molecular Plant Pathology 7:365-379)
Schena et al. 2008 (Plant Pathology 57:64-75)
P. ramorum cox spacer

Ypt1 gene

elicitin
β-tubulin
gpa1
trp1
Conventional
Real time
Real time

Real time
Real time
Conventional
Conventional
Martin et al. 2004 (Phytopathology 94:621-631)
Tooley et al. 2006 (Phytopathology 97:632-642)
Schena et al. 2006 (Molecular Plant Pathology 7:365-379)
Schena et al. 2008 (Plant Pathology 57:64-75)
Bilodeau et al. 2007 (Phytopathology 96:336-345)
Bilodeau et al. 2007 (Phytopathology 96:336-345)
Ioos et al. 2005. (European Journal of Plant Pathology 116:171-176)
Ioos et al. 2005. (European Journal of Plant Pathology 116:171-176)