Phytophthora has been rebuilt to fix security-related problems and to restore GIS tools. These tools allow users to visualize the geospatial, temporal, and environmental contexts of Phytophthora discoveries. The next phase is to update species information and add data derived from large-scale surveys. If you have suggestions and requests to make the database better, please contact Seogchan Kang (sxk55@psu.edu).
PD_00039 (Phytophthora psychrophila)
| P10433 | WPC |
N/A
Country: Germany
Latitude:
Longitude:
Altitude:
May 1, 1995, midnight
Unknown
Received February 2004, Thomas Jung. Holotype. Location: Schechen, Bavaria. Three new species of Phytophthora from European oak forests Thomas JUNG, Everett M. HANSEN, Lori WINTON, Wolfgang OSSWALD and Claude DELATOUR In several studies of oak decline in Europe, one semi-papillate (Phytophthora psychrophila sp. nov.) and two non-papillate homothallic Phytophthora species (P. europaea and P. uliginosa spp. nov.) were isolated, together with other Phytophthora species, from rhizosphere soil samples which could not be assigned to existing taxa. P. psychrophila differs from other semi-papillate species of Waterhouse's morphological Group IV, like P. ilicis and P. hibernalis, by its uniform, dome-shaped and cottonwool-like colony growth pattern on V8 juice agar and malt extract agar, the occurrence of sympodially branched primary hyphae, the high variation in size and shape of the sporangia, shorter pedicels, lower optimum temperature for growth, and ITS sequences. P. europaea is distinguished from related non-papillate Group V and VI species, namely P. fragariae, P. cambivora, and the alder phytophthora, by producing oogonia with tapered bases, irregular walls and exclusively paragynous antheridia, its cardinal temperatures for growth, and ITS sequences. P. uliginosa differs from related Group V and VI species by its large oogonia with exclusively paragynous antheridia, the predominant occurrence of ellipsoid sporangia with markedly wide exit pores, its slow growth, low cardinal temperatures, its colony growth patterns, and ITS sequences. P. uliginosa is separated from P. europaea by its larger oogonia without tapering bases, lower cardinal temperatures and growth rates, different colony growth patterns, and greater aggressiveness on Q. robur.
| Marker | Sequence | Length |
|---|---|---|
| Beta Tubulin | PD_00039_B-tub | 1134 bp |
| TEF1(v.2.0) | PD_00039_EF-1a | 961 bp |
| Enolase | PD_00039_Eno | 1176 bp |
| Internal transcribed spacer region of rDNA | PD_00039_ITS | 790 bp |
| 60S Ribosomal Protein L10 | PD_00039_60S-RPL10 | 496 bp |
| Heat Shock Protein 90 | PD_00039_HSP90 | 1749 bp |
| Large Subunit rRNA | PD_00039_28s-rRNA | 1340 bp |
| TigA gene fusion | PD_00039_Tig | 1642 bp |
| Mitochondrial cox2 locus | PD_00039_cox2 | 1042 bp |
| Mitochondrial Ribosomal Protein S10 | PD_00039_rps10 | 327 bp |
| Mitochondrial NADH Dehydrogenase Subunit 9 | PD_00039_nad9 | 567 bp |
| Mitochondrial Sec-Independent Transporter Protein | PD_00039_secY | 747 bp |
| Mitochondrial cox1 locus | PD_00039_cox1 | 680 bp |