Phytophthora has been rebuilt to fix security-related problems and to restore GIS tools. These tools allow users to visualize the geospatial, temporal, and environmental contexts of Phytophthora discoveries. The next phase is to update species information and add data derived from large-scale surveys. If you have suggestions and requests to make the database better, please contact Seogchan Kang (sxk55@psu.edu).

Phytophthora
Sequence List
Marker: Large Subunit rRNA
Sequence name Genebank accession number Species name Isolate Marker
PD_00001_28s-rRNA EU080070 Phytophthora multivesiculata PD_00001 28s-rRNA
PD_00003_28s-rRNA EU080463 Phytophthora cambivora PD_00003 28s-rRNA
PD_00004_28s-rRNA EU080528 Phytophthora brassicae PD_00004 28s-rRNA
PD_00006_28s-rRNA EU080662 Phytophthora macrochlamydospora PD_00006 28s-rRNA
PD_00007_28s-rRNA EU080720 Phytophthora nicotianae PD_00007 28s-rRNA
PD_00008_28s-rRNA EU080780 Phytophthora erythroseptica PD_00008 28s-rRNA
PD_00009_28s-rRNA EU080856 Phytophthora capsici PD_00009 28s-rRNA
PD_00010_28s-rRNA EU079518 Phytophthora hibernalis PD_00010 28s-rRNA
PD_00393_28s-rRNA EU079560 Phytophthora nicotianae PD_00393 28s-rRNA
PD_00011_28s-rRNA EU079623 Phytophthora capsici PD_00011 28s-rRNA
PD_00012_28s-rRNA EU079697 Phytophthora uliginosa PD_00012 28s-rRNA
PD_00013_28s-rRNA EU079767 Phytophthora syringae PD_00013 28s-rRNA
PD_00014_28s-rRNA EU079832 Phytophthora erythroseptica PD_00014 28s-rRNA
PD_00015_28s-rRNA EU079904 Phytophthora medicaginis PD_00015 28s-rRNA
PD_00016_28s-rRNA EU079967 Phytophthora nicotianae PD_00016 28s-rRNA
PD_00017_28s-rRNA EU080063 Phytophthora megasperma PD_00017 28s-rRNA
PD_00018_28s-rRNA EU080173 Phytophthora humicola PD_00018 28s-rRNA
PD_00019_28s-rRNA EU080240 Phytophthora multivora PD_00019 28s-rRNA
PD_00020_28s-rRNA EU080310 Phytophthora tropicalis PD_00020 28s-rRNA
PD_00021_28s-rRNA EU080337 Phytophthora megasperma PD_00021 28s-rRNA
PD_00022_28s-rRNA EU080343 Phytophthora palmivora PD_00022 28s-rRNA
PD_00023_28s-rRNA EU080383 Phytophthora megasperma PD_00023 28s-rRNA
PD_00024_28s-rRNA EU080389 Phytophthora colocasiae PD_00024 28s-rRNA
PD_00025_28s-rRNA EU080403 Phytophthora primulae PD_00025 28s-rRNA
PD_00026_28s-rRNA EU080410 Phytophthora capsici PD_00026 28s-rRNA
PD_00028_28s-rRNA EU080424 Phytophthora sp. "brasiliensis" PD_00028 28s-rRNA
PD_00029_28s-rRNA EU080431 Phytophthora pseudotsugae PD_00029 28s-rRNA
PD_00030_28s-rRNA EU080438 Phytophthora erythroseptica PD_00030 28s-rRNA
PD_01122_28s-rRNA EU080444 Phytophthora undulata PD_01122 28s-rRNA
PD_00031_28s-rRNA EU080451 Phytophthora cryptogea PD_00031 28s-rRNA
PD_00394_28s-rRNA EU080457 Phytophthora cinnamomi var parvispora PD_00394 28s-rRNA
PD_00032_28s-rRNA EU080469 Phytophthora palmivora PD_00032 28s-rRNA
PD_00033_28s-rRNA EU080476 Phytophthora melonis PD_00033 28s-rRNA
PD_00034_28s-rRNA EU080482 Phytophthora alni subsp. alni PD_00034 28s-rRNA
PD_00035_28s-rRNA EU080494 Phytophthora quercina PD_00035 28s-rRNA
PD_00036_28s-rRNA EU080501 Phytophthora erythroseptica PD_00036 28s-rRNA
PD_00039_28s-rRNA EU080521 Phytophthora psychrophila PD_00039 28s-rRNA
PD_00041_28s-rRNA EU080542 Phytophthora citrophthora PD_00041 28s-rRNA
PD_00042_28s-rRNA EU080548 Phytophthora macrochlamydospora PD_00042 28s-rRNA
PD_00043_28s-rRNA EU080555 Phytophthora cambivora PD_00043 28s-rRNA
PD_00044_28s-rRNA EU080562 Phytophthora syringae PD_00044 28s-rRNA
PD_00045_28s-rRNA EU080569 Phytophthora asparagi PD_00045 28s-rRNA
PD_00046_28s-rRNA EU080576 Phytophthora erythroseptica PD_00046 28s-rRNA
PD_00047_28s-rRNA EU080583 Phytophthora erythroseptica PD_00047 28s-rRNA
PD_00048_28s-rRNA EU080590 Phytophthora ramorum PD_00048 28s-rRNA
PD_00049_28s-rRNA EU080596 Phytophthora quercina PD_00049 28s-rRNA
PD_00050_28s-rRNA EU080610 Phytophthora alni subsp. alni PD_00050 28s-rRNA
PD_00051_28s-rRNA EU080617 Phytophthora bisheria PD_00051 28s-rRNA
PD_00052_28s-rRNA EU080624 Phytophthora tropicalis PD_00052 28s-rRNA
PD_00055_28s-rRNA EU080642 Phytophthora cryptogea PD_00055 28s-rRNA
PD_00390_28s-rRNA EU080656 Phytophthora fragariae PD_00390 28s-rRNA
PD_01117_28s-rRNA EU080669 Phytophthora sp. "cuyabensis" PD_01117 28s-rRNA
PD_00058_28s-rRNA EU080688 Phytophthora ramorum PD_00058 28s-rRNA
PD_00059_28s-rRNA EU080695 Phytophthora medicaginis PD_00059 28s-rRNA
PD_00060_28s-rRNA EU080701 Phytophthora heveae PD_00060 28s-rRNA
PD_00061_28s-rRNA EU080707 Phytophthora mexicana PD_00061 28s-rRNA
PD_00062_28s-rRNA EU080714 Phytophthora hibernalis PD_00062 28s-rRNA
PD_00387_28s-rRNA EU080722 Phytophthora nicotianae PD_00387 28s-rRNA
PD_00064_28s-rRNA EU080734 Phytophthora ramorum PD_00064 28s-rRNA
PD_00065_28s-rRNA EU080740 Phytophthora ramorum PD_00065 28s-rRNA
PD_00066_28s-rRNA EU080746 Phytophthora lateralis PD_00066 28s-rRNA
PD_00067_28s-rRNA EU080753 Phytophthora phaseoli PD_00067 28s-rRNA
PD_00068_28s-rRNA EU080760 Phytophthora phaseoli PD_00068 28s-rRNA
PD_00069_28s-rRNA EU080766 Phytophthora phaseoli PD_00069 28s-rRNA
PD_00070_28s-rRNA EU080773 Phytophthora brassicae PD_00070 28s-rRNA
PD_00071_28s-rRNA EU080787 Phytophthora brassicae PD_00071 28s-rRNA
PD_00072_28s-rRNA EU080794 Phytophthora brassicae PD_00072 28s-rRNA
PD_00073_28s-rRNA EU080800 Phytophthora heveae PD_00073 28s-rRNA
PD_00074_28s-rRNA EU080807 Phytophthora katsurae PD_00074 28s-rRNA
PD_00075_28s-rRNA EU080814 Phytophthora palmivora PD_00075 28s-rRNA
PD_00076_28s-rRNA EU080821 Phytophthora primulae PD_00076 28s-rRNA
PD_00077_28s-rRNA EU080828 Phytophthora primulae PD_00077 28s-rRNA
PD_00078_28s-rRNA EU080835 Phytophthora ipomoeae PD_00078 28s-rRNA
PD_00079_28s-rRNA EU080842 Phytophthora ipomoeae PD_00079 28s-rRNA
PD_00080_28s-rRNA EU080849 Phytophthora ipomoeae PD_00080 28s-rRNA
PD_00081_28s-rRNA EU079479 Phytophthora nemorosa PD_00081 28s-rRNA
PD_00082_28s-rRNA EU079486 Phytophthora europaea PD_00082 28s-rRNA
PD_00083_28s-rRNA EU079492 Phytophthora europaea PD_00083 28s-rRNA
PD_00084_28s-rRNA EU079498 Phytophthora europaea PD_00084 28s-rRNA
PD_00085_28s-rRNA EU079504 Phytophthora multivesiculata PD_00085 28s-rRNA
PD_00086_28s-rRNA EU079511 Phytophthora drechsleri PD_00086 28s-rRNA
PD_00088_28s-rRNA EU079530 Phytophthora citricola PD_00088 28s-rRNA
PD_00089_28s-rRNA EU079536 Phytophthora ramorum PD_00089 28s-rRNA
PD_00090_28s-rRNA EU079542 Phytophthora erythroseptica PD_00090 28s-rRNA
PD_00091_28s-rRNA EU079548 Phytophthora capsici PD_00091 28s-rRNA
PD_00092_28s-rRNA EU079554 Phytophthora psychrophila PD_00092 28s-rRNA
PD_00093_28s-rRNA EU079567 Phytophthora pseudosyringae PD_00093 28s-rRNA
PD_00094_28s-rRNA EU079574 Phytophthora sp. "canalensis" PD_00094 28s-rRNA
PD_00095_28s-rRNA EU079580 Phytophthora thermophila PD_00095 28s-rRNA
PD_00096_28s-rRNA EU079586 Phytophthora multivora PD_00096 28s-rRNA
PD_00097_28s-rRNA EU079592 Phytophthora multivesiculata PD_00097 28s-rRNA
PD_00098_28s-rRNA EU079598 Phytophthora alni subsp. alni PD_00098 28s-rRNA
PD_00099_28s-rRNA EU079604 Phytophthora nemorosa PD_00099 28s-rRNA
PD_00100_28s-rRNA EU079610 Phytophthora sp. "kelmania" PD_00100 28s-rRNA
PD_00101_28s-rRNA EU079617 Phytophthora infestans None PD_00101 28s-rRNA
PD_00102_28s-rRNA EU079630 Phytophthora infestans None PD_00102 28s-rRNA
PD_00103_28s-rRNA EU079637 Phytophthora infestans None PD_00103 28s-rRNA
PD_00104_28s-rRNA EU079644 Phytophthora plurivora PD_00104 28s-rRNA
PD_00105_28s-rRNA EU079650 Phytophthora kernoviae PD_00105 28s-rRNA
PD_00106_28s-rRNA EU079657 Phytophthora nicotianae PD_00106 28s-rRNA
PD_00107_28s-rRNA EU079663 Phytophthora captiosa PD_00107 28s-rRNA
PD_00108_28s-rRNA EU079670 Phytophthora captiosa PD_00108 28s-rRNA
PD_00110_28s-rRNA EU079684 Phytophthora foliorum PD_00110 28s-rRNA
PD_00111_28s-rRNA EU079691 Phytophthora foliorum PD_00111 28s-rRNA
PD_00112_28s-rRNA EU079704 Phytophthora foliorum PD_00112 28s-rRNA
PD_00113_28s-rRNA EU079710 Phytophthora foliorum PD_00113 28s-rRNA
PD_00114_28s-rRNA EU079716 Phytophthora melonis PD_00114 28s-rRNA
PD_00115_28s-rRNA EU079723 Phytophthora palmivora PD_00115 28s-rRNA
PD_00116_28s-rRNA EU079729 Phytophthora palmivora PD_00116 28s-rRNA
PD_00117_28s-rRNA EU079735 Phytophthora heveae PD_00117 28s-rRNA
PD_00118_28s-rRNA EU079741 Phytophthora capsici PD_00118 28s-rRNA
PD_00388_28s-rRNA EU079748 Phytophthora fragariae PD_00388 28s-rRNA
PD_00119_28s-rRNA EU079754 Phytophthora richardiae PD_00119 28s-rRNA
PD_00120_28s-rRNA EU079761 Phytophthora cinnamomi PD_00120 28s-rRNA
PD_00121_28s-rRNA EU079774 Phytophthora cinnamomi PD_00121 28s-rRNA
PD_00122_28s-rRNA EU079780 Phytophthora mirabilis PD_00122 28s-rRNA
PD_00123_28s-rRNA EU079787 Phytophthora vignae PD_00123 28s-rRNA
PD_00124_28s-rRNA EU079794 Phytophthora sojae PD_00124 28s-rRNA
PD_00125_28s-rRNA EU079801 Phytophthora cinnamomi PD_00125 28s-rRNA
PD_00126_28s-rRNA EU079806 Phytophthora quininea PD_00126 28s-rRNA
PD_00127_28s-rRNA EU079812 Phytophthora brassicae PD_00127 28s-rRNA
PD_00128_28s-rRNA EU079819 Phytophthora katsurae PD_00128 28s-rRNA
PD_00129_28s-rRNA EU079826 Phytophthora cambivora PD_00129 28s-rRNA
PD_00389_28s-rRNA EU079839 Phytophthora fragariae PD_00389 28s-rRNA
PD_00130_28s-rRNA EU079845 Phytophthora brassicae PD_00130 28s-rRNA
PD_00131_28s-rRNA EU079851 Phytophthora erythroseptica PD_00131 28s-rRNA
PD_00133_28s-rRNA EU079864 Phytophthora ilicis PD_00133 28s-rRNA
PD_00134_28s-rRNA EU079871 Phytophthora clandestina PD_00134 28s-rRNA
PD_00135_28s-rRNA EU079878 Phytophthora meadii PD_00135 28s-rRNA
PD_00137_28s-rRNA EU079892 Phytophthora colocasiae PD_00137 28s-rRNA
PD_00138_28s-rRNA EU079898 Phytophthora cinnamomi PD_00138 28s-rRNA
PD_00139_28s-rRNA EU079911 Phytophthora colocasiae PD_00139 28s-rRNA
PD_00140_28s-rRNA EU079918 Phytophthora phaseoli PD_00140 28s-rRNA
PD_00141_28s-rRNA EU079923 Phytophthora humicola PD_00141 28s-rRNA
PD_00142_28s-rRNA EU079927 Phytophthora katsurae PD_00142 28s-rRNA
PD_00143_28s-rRNA EU079933 Phytophthora hibernalis PD_00143 28s-rRNA
PD_00144_28s-rRNA EU079939 Phytophthora botryosa PD_00144 28s-rRNA
PD_00145_28s-rRNA EU079946 Phytophthora inundata PD_00145 28s-rRNA
PD_00188_28s-rRNA EU079953 Phytophthora cinnamomi var parvispora PD_00188 28s-rRNA
PD_00146_28s-rRNA EU079960 Phytophthora tentaculata PD_00146 28s-rRNA
PD_00147_28s-rRNA EU079974 Phytophthora megakarya PD_00147 28s-rRNA
PD_00148_28s-rRNA EU079981 Phytophthora megakarya PD_00148 28s-rRNA
PD_00149_28s-rRNA EU079987 Phytophthora megakarya PD_00149 28s-rRNA
PD_00151_28s-rRNA EU079992 Phytophthora pseudotsugae PD_00151 28s-rRNA
PD_00152_28s-rRNA EU079997 Phytophthora tropicalis PD_00152 28s-rRNA
PD_00155_28s-rRNA EU080002 Phytophthora macrochlamydospora PD_00155 28s-rRNA
PD_00156_28s-rRNA EU080009 Phytophthora macrochlamydospora PD_00156 28s-rRNA
PD_00157_28s-rRNA EU080015 Phytophthora uliginosa PD_00157 28s-rRNA
PD_00159_28s-rRNA EU080026 Phytophthora pseudosyringae PD_00159 28s-rRNA
PD_00161_28s-rRNA EU080032 Phytophthora kernoviae PD_00161 28s-rRNA
PD_00401_28s-rRNA EU080033 Phytophthora fallax PD_00401 28s-rRNA
PD_00162_28s-rRNA EU080039 Phytophthora fallax PD_00162 28s-rRNA
PD_00163_28s-rRNA EU080046 Phytophthora kernoviae PD_00163 28s-rRNA
PD_00164_28s-rRNA EU080052 Phytophthora kernoviae PD_00164 28s-rRNA
PD_00165_28s-rRNA EU080057 Phytophthora kernoviae PD_00165 28s-rRNA
PD_00166_28s-rRNA EU080077 Phytophthora hedraiandra PD_00166 28s-rRNA
PD_00167_28s-rRNA EU080082 Phytophthora cryptogea PD_00167 28s-rRNA
PD_00168_28s-rRNA EU080088 Phytophthora trifolii PD_00168 28s-rRNA
PD_00169_28s-rRNA EU080093 Phytophthora lateralis PD_00169 28s-rRNA
PD_00171_28s-rRNA EU080105 Phytophthora cajani PD_00171 28s-rRNA
PD_00172_28s-rRNA EU080110 Phytophthora quininea PD_00172 28s-rRNA
PD_00173_28s-rRNA EU080116 Phytophthora iranica PD_00173 28s-rRNA
PD_00174_28s-rRNA EU080123 Phytophthora taxon Pgchlamydo PD_00174 28s-rRNA
PD_00176_28s-rRNA EU080128 Phytophthora colocasiae PD_00176 28s-rRNA
PD_00177_28s-rRNA EU080134 Phytophthora idaei PD_00177 28s-rRNA
PD_00178_28s-rRNA EU080140 Phytophthora ilicis PD_00178 28s-rRNA
PD_00179_28s-rRNA EU080146 Phytophthora trifolii PD_00179 28s-rRNA
PD_00395_28s-rRNA EU080151 Phytophthora plurivora PD_00395 28s-rRNA
PD_00180_28s-rRNA EU080158 Phytophthora tentaculata PD_00180 28s-rRNA
PD_00392_28s-rRNA EU080160 Phytophthora tropicalis PD_00392 28s-rRNA
PD_00181_28s-rRNA EU080166 Phytophthora boehmeriae PD_00181 28s-rRNA
PD_00175_28s-rRNA_2 EU080180 Phytophthora insolita PD_00175 28s-rRNA
PD_01105_28s-rRNA EU080905 Phytophthora quercetorum PD_01105 28s-rRNA
PD_01107_28s-rRNA EU080261 Phytophthora polonica PD_01107 28s-rRNA
PD_01108_28s-rRNA EU080268 Phytophthora polonica PD_01108 28s-rRNA
PD_01111_28s-rRNA EU080220 Phytophthora glovera PD_01111 28s-rRNA
PD_01112_28s-rRNA EU080227 Phytophthora glovera PD_01112 28s-rRNA
PD_01113_28s-rRNA EU080303 Phytophthora sp. "personii" PD_01113 28s-rRNA
PD_01114_28s-rRNA EU080317 Phytophthora sp. "personii" PD_01114 28s-rRNA
PD_01115_28s-rRNA EU080275 Phytophthora sansomea PD_01115 28s-rRNA
PD_01118_28s-rRNA EU080323 Phytophthora pistaciae PD_01118 28s-rRNA
PD_01119_28s-rRNA EU080329 Phytophthora pistaciae PD_01119 28s-rRNA
PD_01120_28s-rRNA EU080233 Phytophthora sp. "niederhauserii" PD_01120 28s-rRNA
PD_01121_28s-rRNA EU080247 Phytophthora sp. "niederhauserii" PD_01121 28s-rRNA
PD_01296_28s-rRNA EU080214 Phytophthora insolita PD_01296 28s-rRNA
PD_00929_28s-rRNA EU080282 Phytophthora cactorum PD_00929 28s-rRNA
PD_00930_28s-rRNA EU080289 Phytophthora cactorum PD_00930 28s-rRNA
PD_00944_28s-rRNA EU080296 Phytophthora cactorum PD_00944 28s-rRNA
PD_01297_28s-rRNA EU080349 Phytophthora sp. "sulawesiensis" PD_01297 28s-rRNA
PD_01298_28s-rRNA EU080356 Phytophthora sp. "cuyabensis" PD_01298 28s-rRNA
PD_01299_28s-rRNA EU080362 Phytophthora sp. "lagoariana" PD_01299 28s-rRNA
PD_01300_28s-rRNA EU080369 Phytophthora sp. "lagoariana" PD_01300 28s-rRNA
PD_01301_28s-rRNA EU080376 Phytophthora sp. "cuyabensis" PD_01301 28s-rRNA
PD_01011_28s-rRNA EU080187 Phytophthora andina PD_01011 28s-rRNA
PD_01012_28s-rRNA EU080194 Phytophthora andina PD_01012 28s-rRNA
PD_01302_28s-rRNA EU080875 Phytophthora citricola PD_01302 28s-rRNA
PD_01303_28s-rRNA EU080880 Phytophthora hedraiandra PD_01303 28s-rRNA
PD_01306_28s-rRNA EU080893 Phytophthora drechsleri PD_01306 28s-rRNA
PD_01307_28s-rRNA EU080861 Phytophthora tropicalis PD_01307 28s-rRNA
PD_01308_28s-rRNA EU080867 Phytophthora drechsleri PD_01308 28s-rRNA
PD_01309_28s-rRNA EU080873 Phytophthora cambivora PD_01309 28s-rRNA
PD_01627_28s-rRNA None Phytophthora sp. "ohioensis" PD_01627 28s-rRNA
PD_01628_28s-rRNA None Phytophthora taxon Pgchlamydo PD_01628 28s-rRNA
PD_01634_28s-rRNA None Phytophthora inflata PD_01634 28s-rRNA
PD_01634_28s-rRNA_2 None Phytophthora inflata PD_01634 28s-rRNA
PD_01635_28s-rRNA None Phytophthora siskiyouensis PD_01635 28s-rRNA
PD_01636_28s-rRNA None Phytophthora siskiyouensis PD_01636 28s-rRNA
PD_02800_rDNA JX069841 Phytophthora amnicola PD_02800 28s-rRNA